dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00016
Location and strand information: 25664 - 28675 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00017
Location and strand information: 28709 - 30193 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: SusD-like protein

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00018
Location and strand information: 30219 - 32054 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00019
Location and strand information: 32082 - 33869 (+)
Family: GH66
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5459
Protein molecular weight: 67488.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00020
Location and strand information: 33877 - 36042 (+)
Family: GH97
Protein type: CAZyme
Protein description: Glucan 1,4-alpha-glucosidase SusB
Protein isoelectric point: 5.988
Protein molecular weight: 82537.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00021
Location and strand information: 36147 - 38462 (-)
Family: 4.2.2.-|PL21|4.2.2.8|PL21_1|4.2.2.7
Protein type: CAZyme
Protein description: Heparin and heparin-sulfate lyase
Protein isoelectric point: 8.1086
Protein molecular weight: 87310.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00022
Location and strand information: 38722 - 38934 (+)
Family: null
Protein type: null
Protein description: Sec-independent protein translocase protein TatA

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00023
Location and strand information: 39049 - 43023 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00024
Location and strand information: 43259 - 44794 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 6.7143
Protein molecular weight: 58270.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00025
Location and strand information: 44798 - 46777 (-)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1223
Protein molecular weight: 74701.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00026
Location and strand information: 46840 - 47820 (-)
Family: GH43|GH43_29
Protein type: CAZyme
Protein description: Arabinoxylan arabinofuranohydrolase
Protein isoelectric point: 6.361
Protein molecular weight: 37027.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00027
Location and strand information: 47989 - 52209 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00028
Location and strand information: 52621 - 55830 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00029
Location and strand information: 55867 - 57618 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00030
Location and strand information: 57642 - 59435 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00031
Location and strand information: 59505 - 61457 (+)
Family: GH43|GH43_4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7286
Protein molecular weight: 72922.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001599_1|CGC2
Gene ID: MGYG000001599_00032
Location and strand information: 61461 - 62474 (+)
Family: GH43_5|GH43
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase ArbA
Protein isoelectric point: 7.5
Protein molecular weight: 37968.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001599_00019	GH66_e7\|3.2.1.11	alpha-glucan
MGYG000001599_00020	GH97_e1\|3.2.1.3\|3.2.1.20	alpha-glucan
MGYG000001599_00021	PL21_e0\|4.2.2.8\|4.2.2.7\|4.2.2.-	hostglycan
MGYG000001599_00024	GH51_e14\|3.2.1.55	arabinan
MGYG000001599_00025	GH51_e23\|3.2.1.55	arabinan
MGYG000001599_00026	GH43_e75
MGYG000001599_00031	GH43_e169\|3.2.1.99	arabinan
MGYG000001599_00032	GH43_e31\|3.2.1.99\|3.2.1.-	xylan\|arabinan

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001599_00016	hypothetical protein	TC	25664	28675	+	1.B.14.6.1
MGYG000001599_00017	SusD-like protein	TC	28709	30193	+	8.A.46.1.3
MGYG000001599_00018	hypothetical protein	null	30219	32054	+	SusE\| SusF_SusE\| SusF_SusE\| SusF_SusE\| SusF_SusE
MGYG000001599_00019	hypothetical protein	CAZyme	32082	33869	+	GH66
MGYG000001599_00020	Glucan 1,4-alpha-glucosidase SusB	CAZyme	33877	36042	+	GH97
MGYG000001599_00021	Heparin and heparin-sulfate lyase	CAZyme	36147	38462	-	4.2.2.-\| PL21\| 4.2.2.8\| PL21_1\| 4.2.2.7
MGYG000001599_00022	Sec-independent protein translocase protein TatA	null	38722	38934	+	TatA_B_E
MGYG000001599_00023	Sensor histidine kinase RcsC	TF	39049	43023	+	HTH_AraC+HTH_AraC
MGYG000001599_00024	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	43259	44794	-	GH51
MGYG000001599_00025	hypothetical protein	CAZyme	44798	46777	-	GH51
MGYG000001599_00026	Arabinoxylan arabinofuranohydrolase	CAZyme	46840	47820	-	GH43\| GH43_29
MGYG000001599_00027	Sensor histidine kinase RcsC	TF	47989	52209	+	HTH_AraC
MGYG000001599_00028	TonB-dependent receptor SusC	TC	52621	55830	+	1.B.14.6.1
MGYG000001599_00029	hypothetical protein	null	55867	57618	+	SusD-like_3\| SusD_RagB
MGYG000001599_00030	hypothetical protein	null	57642	59435	+	Big_3
MGYG000001599_00031	hypothetical protein	CAZyme	59505	61457	+	GH43\| GH43_4
MGYG000001599_00032	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase ArbA	CAZyme	61461	62474	+	GH43_5\| GH43
Protein ID	Protein Name	Type	Start	End	Strand	Signature